研究実績

査読付き学術論文

英語論文

中国語論文

日本語論文

▪英語論文

96.
Tsuji Satsuki, Miya Masaki, Ushi Masayuki, Sato Hirotoshi, Minamoto Toshifumi, Yamanaka Hiroki,Evaluating intraspecific genetic diversity using environmental DNA and denoising approach: A case study using tank water Environmental DNA 2(1) 42-52(2020)
95.
Thijs Frenken, Takeshi Miki, Maiko Kagami, Dedmer B. Van de Waal,Ellen Van Donk, Thomas Rohrlack, Alena S. Gsell The potential of zooplankton in constraining chytrid epidemics in phytoplankton hosts. Ecology; 101(1), 2020, 02900(2020)
94.
Mutsumi Kimura, Masashi Inoue, and Tokiyoshi Matsuda,Gate Array using Low-Temperature Poly-Si Thin-Film Transistors IEICE Trans. Electron. , Vol. E103-C, No. 7, (2020)
93.
Keisuke Tomioka, Kohei Toyoda, Toshio Ishizaki, Toshihiko Noda, Jun Ohta, and Mutsumi Kimura,Retinal Prosthesis using Thin-Film Devices on a Transparent Substrate and Wireless Power Transfer IEEE Trans. Electron Devices(2020)
92.
Daisuke Togaki, Hideyuki Doi, and Izumi Katano,Detection of freshwater mussels (Sinanodonta spp.) in artificial ponds through environmental DNA: a comparison with traditional hand collection methods.,Limnology 21:59–65. DOI:10.1007/s10201-019-00584-0 (2020)
91.
Teruhiko Takahara, Noriko Iwai, Kiyomi Yasumiba, Takeshi Igawa.,Comparison of the detection of 3 endangered frog species by eDNA and acoustic survey across 3 seasons. Freshwater Science, 39(1), 00-00, (2020)
90.
Yatsuyanagi Tetsu, Ishida Ryotaro, Sakata Masayuki K., Kanabe Takashi, Mizumoto Hiroki, Kobayshi Yumi, Kamada Shoko, Namba Satoko, Nii Hisaya, Mimamoto Toshifumi, Araki Hitoshi, Environmental DNA monitoring for short-term reproductive migration of endemic anadromous species, Shishamo smelt (Spirinchus lanceolatus) Environmental DNA (in press) (2019)
89.
Wye‐Lup Kong, Takeshi Miki, Ya‐Ying Lin, Wataru Makino, Jotaro Urabe, Shi‐Hong Gu, Ryuji J. Machida,Nuclear and mitochondrial ribosomal ratio as an index of animal growth rate. Limnology and Oceanography Methods 17, pp 575–584(2019)
88.
Wu Qianqian, Takami Yasuoki, Minamoto Toshifumi, Ishikawa Toshiyuki,The life history with seasonal migration of the lacustrine shrimp Palaemon paucidens in an ancient lake in JapanEcosphere 10(4) e02628(2019)
87.
Wu Qianqian, Kawano Ken, Ishikawa Toshiyuki, Sakata Masayuki K., Nakao Ryohei, Hiraiwa Masayoshi K., Tsuji Satsuki, Yamanaka Hiroki, Minamoto Toshifumi,Habitat selection and migration of the common shrimp, Palaemon paucidens in Lake Biwa, Japan – an eDNA-based study.Environmental DNA 1(1) 54-63 (2019)
86.
Wu Qianqian, Takami Yasuoki, Minamoto Toshifumi, Ishikawa Toshiyuki,Dispersion and degradation of environmental DNA from caged fish in a marine environment Fisheries Science 85(2) 327-337 (2019)
85.
Kimiko Uchii, Hideyuki Doi, Teruyuki Okahashi, Izumi Katano, Hiroki Yamanaka, Masayuki K. Sakata, and Toshifumi Minamoto,Comparison of inhibition resistance among PCR reagents for detection and quantification of environmental DNA. Environmental DNA 1:359-367. DOI:10.1002/edn3.37 (2019)
84.
Tsuji S, Miya M, Ushio M, Satoh H, Minamoto T & Yamanaka H,Evaluating intraspecific genetic diversity using environmental DNA and denoising approach: A case study using tank water Environmental DNA in press (2019)
83.
Satsuki Tsuji, Teruhiko Takahara, Hideyuki Doi, Naoki Shibata, Hiroki Yamanaka,The detection of aquatic macroorganisms using environmental DNA analysis –a review of methods for collection, extraction, and detection.Environmental DNA 1:99-108. DOI:10.1002/edn3.21(2019)
82.
Takeuchi Aya, Watanabe Shun, Yamamoto Satoshi, Miller Michael J., Fukuba Tatsuhiro, Miwa Tetsuya, Okino Tatsufumi, Mimamoto Toshifumi, Tsukamoto Katsumi,First attempt of an oceanic environmental DNA survey of the spawning ecology of the Japanese eel Anguilla japonica XMarine Ecology Progress Series 609 187-196 (2019)
81.
Takeuchi A, Sado T, Goto, RO, Watanabe S, Aoyama J, Tsukamoto K, Miya M,New PCR primers for metabarcoding environmental DNA from freshwater eels, genus Anguilla Scientific Reports 9 7977 (2019)
80.
Teruhiko Takahara, Takashi Ikebuchi, Hideyuki Doi, Toshifumi Minamoto (Both authors equally contributed.) (2019) Using environmental DNA to estimate the seasonal distribution and habitat preferences of a Japanese basket clam in Lake Shinji, Japan.Estuarine, Coastal and Shelf Science, 221, 15-20, (2019) [doi: 10.1016/j.ecss.2019.02.022]
79.
Sato Yukuto, Mizuyama Masaru, Sato Megumi, Minamoto Toshifumi, Kimura Ryosuke, Toma Claudia,Environmental DNA metabarcoding to detect pathogenic Leptospira and associated organisms in leptospirosis-endemic areas of Japan Scientific Reports 9 6575(2019)
78.
Sakai Yusuke, Kkusakage Ayane, Tsuchida Kota, Tsuzuku Yuka, Okada Shogo, Kitamura Takuto, Tomita Sei, Mukai Takahiko, Tagami Masataka, Takagi Masaki, Yaoi Yuichi, Minamoto Toshifumi,Discovery of an unrecorded population of Yamato salamander (Hynobius vandenburghi) by GIS and eDNA analysis Environmental DNA 1(3) 281-289(2019)
77.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda,Resampling-based framework for unbiased estimator of node centrality over large complex network,Discovery Science. DS 2019. Lecture Notes in Computer Science, vol.11828, pp.428-442, (2019)
76.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda,Efficient identification of critical links based on reachability under the presence of time constraint,PRICAI (2019): Trends in Artificial Intelligence. Lecture Notes in Computer Science, vol.11671, pp.404-418, (2019)
75.
Kouzou Ohara, Kazumi Saito, Masahiro Kimura, and Hiroshi Motoda,Critical node identification based on articulation point detection for uncertain network,International Journal of Networking and Computing, vol.9(2), pp.201-216, (2019)
74.
Hiroaki Murakami, Seokjin Yoon, Akihide Kasai, Toshifumi Minamoto, Satoshi Yamamoto, Masayuki K Sakata, Tomoya Horiuchi, Hideki Sawada, Michio Kondoh, Yoh Yamashita, Reiji Masuda,Dispersion and degradation of environmental DNA from caged fish in a marine environment.Fisheries Science 85: 327-337.(2019)
73.
Morita K, Sahashi G, Miya M, Kamada S, Kanbe H, Araki H,Ongoing localized extinctions of stream-dwelling white-spotted charr populations in small dammed-off habitats of Hokkaido Island, Japan Hydrobiologia  840(1) 207-213( 2019)
72.
Mimaoto Toshifumi, Hayamo Kana, Sakata Masayuki K., Imamura Akio,Real-time PCR assays for environmental DNA detection of three salmonid fish in Hokkaido, Japan: application to winter surveys Ecological Research 34(1) 237-242(2019)
71.
Shunsuke Matsuoka, Yoriko Sugiyama, Hirotoshi Sato,Izumi Katano, Ken Harada, and Hideyuki Doi,Spatial structures of fungal DNA assemblages revealed with eDNA metabarcoding in a forest river network in western Japan. Metabarcoding and Metagenomics 3:e36335. DOI:10.3897/mbmg.3.36335 (2019)
70.
Matsuhashi Saeko, Mimamoto Toshifumi, Doi Hideyuki,Seasonal change in environmental DNA concentration of a submerged aquatic plant speciesFreshwater Science 38 654-660(2019)
69.
Mario Cordeiro, Rui Portocarrero Sarmento, Pavel Brazdil, Masahiro Kimura, and Joao Gama,Identifying, ranking and tracking community leaders in evolving social networks,Complex Networks and Their Applications VIII. COMPLEX NETWORKS 2019. Studies in Computational Intelligence, vol.881, pp.198-210,(2019)
68.
Daisuke Kyogoku, Yutaro Kataoka, Michio Kondoh, Who determines the timing of inflorescence closure of a sexual dandelion? Pollen donors versus recipients. Evolutionary Ecology 33: 701-712.(2019)
67.
Daisuke Kyogoku, Michio Kondoh, Teiji Sota, Does past evolutionary history under different mating regimes influence the demographic dynamics of interspecific competition? Ecology and Evolution 9: 8616-8624.(2019)
66.
Komai T, Gotoh Ro, Sado T and Miya M,Development of a new set of PCR primers for eDNA metabarcoding from decapod crustaceans Metabarcoding and Metagenomics 3e33835 (2019)
65.
Katsuya Kito, Shuhei Kitajima, Tokiyoshi Matsuda, Masahide Inoue, Mitsuo Tamura, and Mutsumi Kimura,Infrared Sensors using Poly-Si Thin-Film Transistors for Proximity Sensors integrated in Smartphone Displays J. SID, Vol. 27, Issue 3, pp. 147-154, (2019)
64.
Mutsumi Kimura, Sensor Applications of Thin-Film Devices originating in Display Technologies J. SID, Vol. 27, Issue 12, pp. 741-756, (2019)
63.
Mutsumi Kimura,Emerging Applications using Metal-Oxide Semiconductor Thin-Film Devices Jpn. J. Appl. Phys., Vol. 58, No. 9, 090503(2019)
62.
Kano Kei, Kkudo Mitsuru, Yoshizawa Go, Mizumachi Eri, Suga Makiko, Akya Naonori, EbinaA Kuniyoshi, Goto Takayuki, Itoh Masayuki, Joh Ayami, Maenami Haruhiko, Minamoto Toshifumi, Mori Mikihiko, Morimura Yoshitaka, Motoki Tamaki, Nakayama Akie, Takanashi Katsuya,How science, technology and innovation can be placed in broader visions? -Public opinions from inclusive public engagement activities-Journal of Science Communication 18(3) A02 (2019)
61.
Aozora Kakuda, Hideyuki Doi, Rio Souma, Mariko Nagano, Toshifumi Minamoto, and Izumi Katano,Environmental DNA detection and quantification of invasive red-eared sliders, Trachemy scripta elegans, in ponds and the influence of water quality. PeerJ 7:e8155. DOI:10.7717/peerj.8155 (2019)
60.
Jo Toshiaki, Murakami Hiroaki, Yamamoto Satoshi, Masuda Reiji, Mimaoto Toshifumi,Effect of water temperature and fish biomass on environmental DNA shedding, degradation, and size distribution Ecology and Evolution 9 1135-1146 (2019)
59.
Jo Toshiaki, Fukuoka Arisa, Uchida Kei, Ushimaru Atushi, Mimamoto Toshifumi,Multiplex real-time PCR enables the simultaneous detection of environmental DNA from freshwater fishes: a case study of three exotic and three threatened native fishes in Japan Biological Invasions (in press) (2019)
58.
Jo Toshiaki, Arimoto Mio, Murakami Hiroaki, Masuda Reiji, Minamoto Toshifumi,Particle size distribution of environmental DNA from the nuclei of marine fish Environmental Science & Technology 53(16) 9947-9956 (2019)
57.
Jo Toshiaki, Arimoto Mio, Murakami Hiroaki, Masuda Reiji, Minamoto, Toshifumi, Estimating shedding and decay rates of environmental nuclear DNA with relation to water temperature and biomass Environmental DNA (in press) (2019)
56.
Noriko Iwai, Kiyomi Yasumiba, Teruhiko Takahara (2019) Efficacy of environmental DNA to detect and quantify stream tadpoles of Odorrana splendida. Royal Society Open Science, 6, 181798, (2019) [doi: 10.1098/rsos.181798]
55.
Itakura Hikaru, Wakiya Ryoshiro, Yamamoto Satoshi, Kaifu Kenzo, Ssato Takuya, Minamoto Toshifumi,Environmental DNA analysis reveals the spatial distribution, abundance and biomass of Japanese eels at the river basin scale Aquatic Conservation: Marine and Freshwater Ecosystems 29(3) 361-373(2019)
54.
Kousuke Ikeda, Hideyuki Doi, Shigeharu Terui, Atsuko Kato, Takashi Mitsuzuka, Tadashi Kawai, and Junjiro N. Negishi Estimating native and invasive crayfish distributions in relation to culvert barriers with environmental DNA. Freshwater Science 38:654–660. DOI:10.1086/704998(2019)
53.
Takeshi Igawa, Teruhiko Takahara, Shohei Komaki, Quintin Lau.An application of PCR-RFLP species identification assay for environmental DNA detection PeerJ, 7, e7597, (2019)[doi.org/10.7717/peerj.7597]
52.
Horiguchi Tomoya, Masuda Reiji, Murakami Hiroaki, Yamamoto Satoshi, Minamoto Toshifumi,Biomass-dependent emission of environmental DNA in jack mackerel Trachurus japonicus juveniles Journal of Fish Biology 95 979-981(2019)
51.
Minoru Higuchi, Kanji Matsutani, Masahito Kumano, and Masahiro Kimura,Discovering spatio-temporal latent influence in geographical attention dynamics,Machine Learning and Knowledge Discovery in Databases. ECML PKDD 2018. Lecture Notes in Computer Science, vol.11052, pp.517-534, (2019)
50.
Kazuya Fujii, Hideyuki Doi, Shunsuke Matsuoka, Mariko Nagano, Hirotoshi Sato, and Hiroki Yamanaka,Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods. PLOS ONE 14: e0210357 (2019) DOI: 10.1371/journal.pone.0210357
49.
Fornillos Raffy Jay C., Sato Marcello Otake, Tabios Ian Kim B., Sato Megumi, Leonard Lydia R., Chigasa Yuichi, Minamoto Toshifumi, Kikuchi Mihoko, Legaspi Emelda R., Fontanilla Ian Kendrich C.Detection of Schistosoma japonicum and Oncomelania hupensis quadrasi environmental DNA and its potential utility to schistosomiasis japonica surveillance in the Philippines PLOS ONE 14(11) e0224617 (2019)
48.
Hideyuki Doi, Keiichi Fukaya, Shin-ichiro Oka, Keiichi Sato, Michio Kondoh, and Masaki Miya Evaluation of detection probabilities at the water-filtering and initial PCR steps in environmental DNA metabarcoding using a multispecies site occupancy model.Scientific Reports 9:3581 (2019).  DOI: 10.1038/s41598-019-40233-1
47.
Calata Fritz Ivy C., Caranguian Camille Z., Mendoza Jillian Ela M., Fornillos Raffy Jay C., Tabios Ian Kim B., Fontanilla Ian Kendrich C., Leonardo Lydia R., Sunico Louie S., ChugasaA Yuichi, Kikuchi Mihoko, Ssato Megumi, Minamoto Toshifumi, Baonan Zenaida G., Sato Marcello Otake, Analysis of environmental DNA and edaphic factors for the detection of the snail intermediate host Oncomelania hupensis quadrasi Pathogens 8(4) 160 (2019)
46.
Minoru Higuchi, Kanji Matsutani, Masahito Kumano, and Masahiro Kimura:Discovering spatio-temporal latent influence in geographical attention dynamics,In M. Berlingerio et al (eds.), Machine Learning and Knowledge Discovery in Databases (ECML PKDD 2018),Lecture Notes in Computer Science, Vol.11052, pp.517-534, Springer, 2019.
45.
Wu Qianqian, Kawano Ken, Uehara Yoshitoshi, Okuda Noboru, Hongo Masamichi, Tsuji Satsuki, Yamanaka Hiroki, Minamoto ToshifumiEnviromental DNA reveals non-migratory individuals of Palaemon paucidens overwintering in Lake Biwa shallow waters Freshwater Science 37(2) 307-314 (2018)
44.
Hiroki Yamanaka, Daiki Takao, Atsushi Maruyama, Akio Imamura,Species-specific detection of the endangered piscivorous cyprinid fish Opsariichthys uncirostris uncirostris, three-lips, using environmental DNA analysis. Ecological Research 33(5): 1075-1078(2018)
43.
Masayuki Ushio, Hiroaki Murakami, Reiji Masuda, Tetsuya Sado, Masaki Miya, Sho Sakurai, Hiroki Yamanaka, Toshifumi Minamoto, Michio Kondoh,Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing. Metabarcoding and Metagenomics 2: e23297.(2018)
42.
Masayuki Ushio, Chih-hao Hsieh, Reiji Masuda, Ethan R Deyle, Hao Ye, Chun-Wei Chang, George Sugihara, Michio Kondoh, Fluctuating interaction network and time-varying stability of a natural fish community.Nature 554: 360-363.(2018)
41.
Keisuke Tomioka, Kohei Miyake, Keigo Misawa, Kohei Toyoda, and Mutsumi Kimura,Photo-sensing Circuit using Thin-Film Transistors for Retinal Prosthesis Jpn. J. Appl. Phys., Vol. 57, No. 10, 1002B1, (2018)
40.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda, Critical link identification based on bridge detection for network with uncertain connectivity, Foundations of Intelligent Systems. ISMIS 2018. Lecture Notes in Computer Science, vol.11177, pp.88-99, (2018)
39.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda,Efficient detection of critical links to maintain performance of network with uncertain connectivity, PRICAI 2018: Trends in Artificial Intelligence. Lecture Notes in Computer Science, vol.11012, pp.282-295, (2018)
38.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda, Which is more influential, "who" or "when" for a user to rate in online review site?, Intelligent Data Analysis, vol.22(3), pp.639-657, (2018)
37.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda, Accurate and efficient detection of critical links in network to minimize information loss,Journal of Intelligent Information Systems, vol.51(2), pp.235-255, (2018)
36.
Nakagawa H, Yamamoto S, Minamoto T, Satoh Y, Sado T, Miya M.Comparing local- and regional-scale estimations of the diversity of stream fish using eDNA metabarcoding and conventional observation methods Freshwater Biology 63(6) 569-580 (2018)
35.
Atsushi Maruyama, Kousuke Sugatani, Kazuki Watanabe, Hiroki Yamanaka, Akio Imamura,Environmental DNA analysis as a non‐invasive quantitative tool for reproductive migration of a threatened endemic fish in rivers. Ecology and Evolution 8(23): 11964-11974.(2018)
34.
Naoyuki Kishimoto, Masashi Okumura, Feasibility of mercury-free chemical oxygen demand (COD) test with excessive addition of silver sulfate.Journal of Water and Environment Technology 16(6), 221–232, (2018)
33.
Kawatsu Kazutaka, Michio Kondoh, Density-dependent interspecific interactions and the complexity–stability relationship.Proceedings of the Royal Society B: Biological Sciences 285: 20180698.(2018)
32.
Yoshikazu Kato, Michio Kondoh, Naoto F Ishikawa, Hiroyuki Togashi, Yukihiro Kohmatsu, Mayumi Yoshimura, Chikage Yoshimizu, Takashi F Haraguchi, Yutaka Osada, Nobuhito Ohte, Naoko Tokuchi, Noboru Okuda, Takeshi Miki, Ichiro Tayasu,Using food network unfolding to evaluate food–web complexity in terms of biodiversity: theory and applications. Ecology Letters 21: 1065-1074(2018)
31.
Kazuya Fujii, Hideyuki Doi, Shunsuke Matsuoka, Mariko Nagano, Hirotoshi Sato,Hiroki Yamanaka, Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods.Ecology and Evolution 8(23): 11964-11974.(2018)
30.
Kouzou Ohara, Kazumi Saito, Masahiro Kimura, and Hiroshi Motoda:Critical node identification based on articulation point detection for network with uncertain connectivity,Proceedings of the 6th International Symposium on Computing and Networking (CANDAR'18), pp.146-152, IEEE, 2018.
29.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda:Critical link identification based on bridge detection for network with uncertain connectivity,In M. Ceci et al (eds.), Foundations of Intelligent Systems (ISMIS 2018),Lecture Notes in Computer Science, Vol.11177, pp.88-99, Springer, 2018.
28.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda:Accurate and efficient detection of critical links in network to minimize information loss,Journal of Intelligent Information Systems, Vol.51, No.2, pp.235-255, 2018..
27.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda:Efficient detection of critical links to maintain performance of network with uncertain connectivity,In X. Geng and BH. Kang (eds.), Trends in Artificial Intelligence (PRICAI 2018),Lecture Notes in Computer Science, Vol.11012, pp.282-295, Springer, 2018..
26.
Kazumi Saito, Kouzou Ohara, Masahiro Kimura, and Hiroshi Motoda:Which is more influential, "who" or "when" for a user to rate in online review site?,Intelligent Data Analysis, Vol.22, No.3, pp.639-657, 2018.
25.
Naoyuki Kishimoto, Masashi Okumura. (2018) Feasibility of mercury-free chemical oxygen demand (COD) test with excessive addition of silver sulfate, Journal of Water and Environment Technology 16: 221-232.
24.
Kazuya Fujii , Hideyuki Doi , Shunsuke Matsuoka, Mariko Nagano, Hirotoshi Sato, Hiroki Yamanaka. (2018) Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods. PLoS ONE 14:e0210357.
23.
Atsushi Maruyama, Kousuke Sugatani, Kazuki Watanabe, Hiroki Yamanaka, Akio Imamura. (2018) Environmental DNA analysis as a non‐invasive quantitative tool for reproductive migration of a threatened endemic fish in rivers. Ecology and Evolution 8:11964-11974.
22.
Hiroki Yamanaka, Daiki Takao, Atsushi Maruyama, Akio Imamura. (2018) Species-specific detection of the endangered piscivorous cyprinid fish Opsariichthys uncirostris uncirostris, three-lips, using environmental DNA analysis. Ecological Research 33:1075-1078.
21.
Satsuki Tsuji, Yuka Iguchi, Naoki Shibata, Iori Teramura, Tadao Kitagawa, Hiroki Yamanaka. (2018) Real-time multiplex PCR for simultaneous detection of multiple species from environmental DNA: an application on two Japanese medaka species. Scientific Reports 8:9138.
20.
Wu Qianqian, Ken Kawano, Yoshitoshi Uehara, Noboru Okuda, Masamichi Hongo, Satsuki Tsuji, Hiroki Yamanaka, Toshifumi Minamoto. (2018) Environmental DNA reveals non-migratory individuals of Palaemon paucidens overwintering in Lake Biwa shallow waters. Freshwater Science 37:307-314.
19.
Masayuki Ushio, Hiroaki Murakami, Reiji Masuda, Tetsuya Sado, Masaki Miya, Sho Sakurai, Hiroki Yamanaka, Toshifumi Minamoto, Michio Kondoh. (2018) Quantitative monitoring of multispecies fish environmental DNA using high-throughput sequencing. Metabarcoding & Metagenomics 2:e23297.
18.
Masayuki Ushio, Hisato Fukuda, Toshiki Inoue, Kobayashi Makoto,Osamu Kishida, Keiichi Sato, Koichi Murata, Masato Nikaido, TetsuyaSado, Yukuto Sato,Masamichi Takeshita, Wataru Iwasaki, Hiroki Yamanaka, Michio Kondoh, Masaki Miya. (2017) Environmental DNA enables detection of terrestrial mammals 6 from forest pond water. Molecular Ecology Resources 17:e63-e75.
17.
Hirotoshi Sato, Yuki Sogo, Hideyuki Doi, Hiroki Yamanaka. (2017) Usefulness and limitations of sample pooling for environmental DNA metabarcoding of freshwater fish communities. Scientific Reports 7:14860.
16.
Kimiko Uchii, Hideyuki Doi ,Hiroki Yamanaka, Toshifumi Minamoto. (2017) Distinct seasonal migration patterns of Japanese native andnon-native genotypes of common carp estimated by environmental DNA. Ecology and Evolution 7:8515-8522.
15.
Satsuki Tsuji, Masayuki Ushio, Sho Sakurai, Toshifumi Minamoto, Hiroki Yamanaka(2017)Water temperature-dependent degradation of environmental DNA and its relation to bacterial abundance. PLOS ONE 12:e0176608.
14.
Hiroki Yamanaka, Toshifumi Minamoto, Junichi Matsuura, Sho Sakurai, Satsuki Tsuji, Hiromu Hotozawa, Masamichi Hongo, Yuki Sogo, Naoki Kakimi, Iori Teramura, Masaki Sugita, Miki Baba, Akihiro Kondo. (2017) A simple method for preserving environmental DNA in water samples at ambient temperature by addition of cationic surfactant. Limnology 18:233-241.
13.
Toshifumi Minamoto, Kimiko Uchii, Teruhiko Takahara, Takumi Kitayoshi, Satsuki Tsuji, Hiroki Yamanaka, Hideyuki Doi. (2017) Nuclear internal transcribed spacer-1 as a sensitive genetic marker for environmental DNA studies in common carp Cyprinus carpio. Molecular Ecology Resources 17:324-333.
12.
Hideyuki Doi, Kimiko Uchii, Saeko Matsuhashi, Hiroki Yamanaka, Toshifumi Minamoto. (2017) Isopropanol precipitation method for collecting fish environmental DNA. Limnology and Oceanography: Methods 15:212-218.
11.
Hideyuki Doi, Ryutei Inui, Yoshihisa Akamatsu, Kazuki Kanno, Hiroki Yamanaka, Teruhiko Takahara, Toshifumi Minamoto. (2017) Environmental DNA analysis for estimating the abundance and biomass of stream fish. Freshwater Biology 62: 30-39.
10.
Satsuki Tsuji, Hiroki Yamanaka, Toshifumi Minamoto. (2017) Effects of water pH and proteinase K treatment on the yield of environmental DNA from water samples. Limnology 18: 1-7.
9.
Junya Yamamoto, Naoyuki Kishimoto, Satoshi Ichise, Seiko Furuta. (2016) Effects of environmental factors on microalgal biomass production in wastewater using cyanobacteria Aphanothece clathrata and Microcystis wesenbergii, Environmental Technology 37: 466-471.
8.
Masaki Miya, Toshifumi Minamoto, Hiroki Yamanaka, Shin-ichiro Oka, Satoshi Yamamoto, Tetsuya Sado, Hideyuki Doi. (2016) Use of a filter cartridge for filtrationn of water samples and extraction of environmental DNA. Journal of Visualized Experiments. 117:e54741.
7.
*Hiroki Yamanaka, *Hiromu Motozawa, Satsuki Tsuji, Ryohei C Miyazawa, Teruhiko Takahara, Toshifumi Minamoto. (2016) On-site filtration of water samples for environmental DNA analysis to avoid DNA degradation during transportation. Ecological Research 31:963-967. (*Both authors contributed equally to this work)
6.
Satoshi Yamamoto, Kenji Minami, Keiichi Fukaya, Kohji Takahashi, Hideki Sawada, Hiroaki Murakami, Satsuki Tsuji, Hiroki Hashizume, Shou Kubonaga, Tomoya Horiuchi, Masamichi Hongo, Jo Nishida, Yuta Okugawa, Ayaka Fujiwara, Miho Fukuda, Shunsuke Hidaka, Keita W. Suzuki, Masaki Miya, Hitoshi Araki, Hiroki Yamanaka, Atsushi Maruyama, Kazushi Miyashita, Reiji Masuda, Toshifumi Minamoto, Michio Kondoh. (2016) Environmental DNA as a 'snapshot' of fish distribution: a case study of Japanese jack mackerel in Maizuru Bay, Sea of Japan. PLOS ONE 11: e1249786.
5.
Hiroki Yamanaka, Toshifumi Minamoto. (2016) The use of environmental DNA of fishes as an efficient method of determining habitat connectivity. Ecological Indicators 62:147-153.
4.
Hisato Ikegaya, Shiro Suzuki, Satoshi Ichise, Seiko Furuta, Takuji Ohigashi, Daiya Bamba, Hidetoshi Nambu, Hiroshi Kihara, Naoyuki Kishimoto, Kuniko Takemoto, (2015) Estimation of organic carbon content of the cyanobacterium Synechococcus sp. by soft-X-ray microscopy, Geomicrobiology Journal 32: 827-835.
3.
Kenta Torihara, Naoyuki Kishimoto. (2015) Evaluation of growth characteristics of Euglena gracilis for microbial biomass production using wastewater, Journal of Water and Environment Technology 13: 195-205.
2.
Naoyuki Kishimoto, Chihiro Yamamoto, Kei Suzuki, Satoshi Ichise. (2015) Does a decrease in chlorophyll a concentration in Lake Biwa mean a decrease in primary productivity by phytoplankton?, Journal of Water and Environment Technology 13: 1-14.
1.
Sumio Sugisaki, Tokiyoshi Matsuda, Mutsunori Uenuma, Toshihide Nabatame, Yasuhiko Nakashima, Takahito Imai, Yusaku Magari, Daichi Koretomo, Mamoru Furuta, and Mutsumi Kimura Memristive Characteristic of an Amorphous Ga-Sn-O Thin-Film Device Scientific Reports, to be published

▪中国語論文

1.
陈治, 宋娜, 源利文, 邬倩倩, 高天翔,舟山近海水样环境DNA获取方法的建立 水生生物学報 44(1)(2020)

▪日本語論文

20.
樋口稔, 松谷貫司, 熊野雅仁, 木村昌弘,地理的アテンションダイナミクスにおける影響構造の抽出,電子情報通信学会論文誌 D, vol.J102-D(10), pp.685-697 (2019)
19.
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