Center for Biodiversity Science

Research Achievements

Peer-Reviewed Articles

In English / In Chinese / In Japanese

▪In English

165.
Ito, G., & Koya, Y. Phylogeographic structure of an endemic lineage of the eight-barbel loach Lefua echigonia around the Suzuka and Yoro Mountains, central Honshu, Japan. Biogeography, 24, 39–45. LINK
164.
Wu, L., Wu, Q., Inagawa, T., Okitsu, J., Sakamoto, S., & Minamoto, T. (2023). Estimating the spawning activity of fish species using nuclear and mitochondrial environmental DNA concentrations and their ratios. Freshwater Biology, 68(1), 103-114. LINK
163.
Jo, T. S. (2023). Correlation between the number of eDNA particles and species abundance is strengthened by warm temperature: simulation and meta-analysis. Hydrobiologia, 850(1), 39-50. LINK
162.
Ogata, S., Nishiwaki, A., Yamazoe, K., Sugai, K., & Takahara, T. (2023). Discovery of unknown new ponds occupied by the endangered giant water bug Kirkaldyia deyrolli (Hemiptera: Heteroptera: Belostomatidae) by combining environmental DNA and capture surveys. Entomological Science, 26(1), e12540. LINK
161.
Wu, L., Yamamoto, Y., Yamaguchi, S., & Minamoto, T. (2022). Spatiotemporal changes in environmental DNA concentrations caused by fish spawning activity. Ecological Indicators, 142, 109213. LINK
160.
Wakiya, R., Itakura, H., Hirae, T., Igari, T., Manabe, M., Matsuya, N., Sakata, M.K., Minamoto, T., Yada, T., & Kaifu, K. (2022). Slower growth of farmed eels stocked into rivers with higher wild eel density. Journal of Fish Biology, 101(3), 613-627. LINK
159.
Tsugeki, N., Nakane, K., Doi, H., Ochi, N., & Kuwae, M. (2022). Reconstruction of 100-year dynamics in Daphnia spawning activity revealed by sedimentary DNA. Scientific Reports, 12(1), 1741. LINK
158.
Jo, T., Tsuri, K., Hirohara, T., & Yamanaka, H. (2022). Warm temperature and alkaline conditions accelerate environmental RNA degradation. Environmental DNA. LINK
157.
Jo, T., & Yamanaka, H. (2022). Meta‐analyses of environmental DNA downstream transport and deposition in relation to hydrogeography in riverine environments. Freshwater Biology, 67(8), 1333-1343. LINK
156.
Jo, T., & Yamanaka, H. (2022). Fine‐tuning the performance of abundance estimation based on environmental DNA (eDNA) focusing on eDNA particle size and marker length. Ecology and Evolution, 12(8), e9234. LINK
155.
Asai, T., Sugiyama, M., Omatsu, T., Yoshikawa, M., & Minamoto, T. (2022). Isolation of extended‐spectrum β‐lactamase‐producing Escherichia coli from Japanese red fox (Vulpes vulpes japonica). MicrobiologyOpen, 11(5), e1317. LINK
154.
Takahara, T., Doi, H., Kosuge, T., Nomura, N., Maki, N., Minamoto, T., & Watanabe, K. (2022). Effective environmental DNA collection for an endangered catfish species: testing for habitat and daily periodicity. Ichthyological Re07search, 1-10. LINK
153.
Takahara, T., Fukui, K., Hiramatsu, D., Doi, H., Fujii, M., & Minamoto, T. (2023). Development of primer–probe sets for environmental DNA-based monitoring of pond smelt Hypomesus nipponensis and Japanese icefish Salangichthys microdon. Landscape and Ecological Engineering, 19(1), 11-19. LINK
152.
Shiozuka, N., Katano, I., Doi, H., Nakamura, M., Shirako, T., & Ichiyanagi, H. (2022). Diurnal detection of environmental DNA of the semi-aquatic water shrew Chimarrogale platycephala using 25-h water sampling in streams. Landscape and Ecological Engineering, 19(1), 69-77. LINK
151.
Nagayama, S., Oota, M., Fujita, T., Kitamura, J. I., Minamoto, T., Mori, S., Kato, M., Takeyama, N., Takino, F., Yonekura, R., & Yamanaka, H. (2022). Autumn dispersal and limited success of reproduction of the deepbody bitterling (Acheilognathus longipinnis) in terrestrialized floodplain. Knowledge & Management of Aquatic Ecosystems, (423), 4. LINK
150.
Sakata, M. K., Sato, M., Sato, M. O., Watanabe, T., Mitsuishi, H., Hikitsuchi, T., Kobayashi, J., & Minamoto, T. (2022). Detection and persistence of environmental DNA (eDNA) of the different developmental stages of a vector mosquito, Culex pipiens pallens. Plos one, 17(8), e0272653. LINK
149.
Oka, S. I., Miya, M., & Sado, T. (2022). Gravity filtration of environmental DNA: A simple, fast, and power-free method. MethodsX, 9, 101838. LINK
148.
Ogata, S., Doi, H., Igawa, T., Komaki, S., & Takahara, T. (2022). Environmental DNA methods for detecting two invasive alien species (American bullfrog and red swamp crayfish) in Japanese ponds. Ecological Research, 37(6), 701-710. LINK
147.
Nakagawa, H., Fukushima, K., Sakai, M., Wu, L., & Minamoto, T. (2022). Relationships between the eDNA concentration obtained from metabarcoding and stream fish abundance estimated by the removal method under field conditions. Environmental DNA, 4(6), 1369-1380. LINK
146.
Kimura, M., Yamanaka, H., & Nakashima, Y. (2022). Application of Machine Learning to Environmental DNA Metabarcoding. IEEE Access, 10, 101790-101794. LINK
145.
Miya, M., Sado, T., Oka, S. I., & Fukuchi, T. (2022). The use of citizen science in fish eDNA metabarcoding for evaluating regional biodiversity in a coastal marine region: A pilot study. Metabarcoding and Metagenomics, 6, e80444. LINK
144.
Miya, M. (2022). Environmental DNA metabarcoding: a novel method for biodiversity monitoring of marine fish communities. Annual Review of Marine Science, 14, 161-185. LINK
143.
Minamoto, T. (2022). Environmental DNA analysis for macro-organisms: species distribution and more. DNA Research, 29(3), dsac018. LINK
142.
Matsuoka, S., Sugiyama, Y., Nagano, M., & Doi, H. (2022). Influence of DNA extraction kits on freshwater fungal DNA metabarcoding. PeerJ, 10, e13477. LINK
141.
Kuwae, M., Finney, B. P., Shi, Z., Sakaguchi, A., Tsugeki, N., Omori, T., Agusa, T., Suzuki, Y., Yokoyama, Y., Hinata, H., Hatada, Y., Inoue, J., Matsuoka, K., Shimada, M., Takahara, H., Takahashi, S., Ueno, D., Amano, A., Tsutsumi, J., Yamamoto, M., Takemura, K., Yamada, K., Ikehara, K., Haraguchi, T., Tims, S., Froehlich, M., Fifield, L. K., Aze, T., Sasa, K., Takahashi, T., Matsumura, M., Tani, Y., Leavitt, P. R., Doi, H., Irino, T., Moriya, K., Hayashida, A., Hirose, K., Suzuki, H., & Saito, Y. (2022). Beppu Bay, Japan, as a candidate Global Boundaries Stratotype Section and Point for an Anthropocene series. The Anthropocene Review, 20530196221135077. LINK
140.
Jo, T., Sato, M., Minamoto, T., & Ushimaru, A. (2022). Valuing the cultural services from urban blue‐space ecosystems in Japanese megacities during the COVID‐19 pandemic. People and Nature, 4(5), 1176-1189. LINK
139.
Jo, T. S., Tsuri, K., & Yamanaka, H. (2022). Can nuclear aquatic environmental DNA be a genetic marker for the accurate estimation of species abundance?. The Science of Nature, 109(4), 38. LINK
138.
Jo, T. S. (2022). A higher DNA damage rate in aqueous eDNA particles suggests intra‐cellular eDNA degradation in cellular environments. Environmental DNA, 5(2), 343-349. LINK
137.
Fukuzawa, T., Kameda, Y., Nagata, H., Nishizawa, N., & Doi, H. (2022). Filtration extraction method using a microfluidic channel for measuring environmental DNA. Molecular Ecology Resources, 22(7), 2651-2661. LINK
136.
Fujiwara, Y., Tsuchida, S., Kawato, M., Masuda, K., Sakaguchi, S. O., Sado, T., Miya, M., & Yoshida, T. (2022). Detection of the Largest Deep-Sea-Endemic Teleost Fish at Depths of Over 2,000 m Through a Combination of eDNA Metabarcoding and Baited Camera Observations. Frontiers in Marine Science, 9, 945758. LINK
135.
Banerjee, P., Stewart, K. A., Dey, G., Antognazza, C. M., Sharma, R. K., Maity, J. P., Saha, S., Doi, H., de Vere, N., Chan, M. W.,, Lin, P. Y., Chao, H. C., & Chen, C. Y. (2022). Environmental DNA analysis as an emerging non-destructive method for plant biodiversity monitoring: a review. AoB Plants, 14(4), plac031. LINK
134.
Banerjee, P., Stewart, K. A., Antognazza, C. M., Bunholi, I. V., Deiner, K., Barnes, M. A., Saha, S., Verdier H., Doi, H., Maity, J. P., Chan, M. W., & Chen, C. Y. (2022). Plant–animal interactions in the era of environmental DNA (eDNA)—A review. Environmental DNA, 4(5), 987-999. LINK
133.
Tsuji, S., Nakao, R., Saito, M., Minamoto, T., & Akamatsu, Y. (2022). Pre-centrifugation before DNA extraction mitigates extraction efficiency reduction of environmental DNA caused by the preservative solution (benzalkonium chloride) remaining in the filters. Limnology, 23(1), 9-16. LINK
132.
Miya, M. (2022). Environmental DNA Metabarcoding: A novel method for biodiversity monitoring of marine fish communities. Annual Review of Marine Science, 14,161-185. LINK
131.
Uchii, K., Wakimura, K., Kikko, T., Yonekura, R., Kawaguchi, R., Komada, H., Yamanaka, H., Kenzaka, T., & Tani, K. (2022). Environmental DNA monitoring method of the commercially important and endangered fish Gnathopogon caerulescens Limnology, 23(1), 49-56. LINK
130.
Jo, T., Takao, K., & Minamoto, T. (2022). Linking the state of environmental DNA to its application for biomonitoring and stock assessment: Targeting mitochondrial/nuclear genes, and different DNA fragment lengths and particle sizes. Environmental DNA, 4(2), 271-283. LINK
129.
de Santana, C. D., Parenti, L. R., Dillman, C. B., Coddington, J. A., Bastos, D. A., Baldwin, C. C., Zuanon, J., Torrente-Vilara, G., Covain, R., Menezes, N, A., Datovo, A., & Miya, M. (2021). The critical role of natural history museums in advancing eDNA for biodiversity studies: a case study with Amazonian fishes. Scientific reports, 11(1), 1-22. LINK
128.
Yoneya, K., Miki, T., Van den Wyngaert, S., Grossart, H. P., & Kagami, M. (2021). Non-random patterns of chytrid infections on phytoplankton host cells: mathematical and chemical ecology approaches. Aquatic Microbial Ecology, 87,1-15. LINK
127.
Yasashimoto, T., Sakata, M. K., Sakita, T., Nakajima, S., Ozaki, M., & Minamoto, T. (2021). Environmental DNA detection of an invasive ant species (Linepithema humile) from soil samples. Scientific reports, 11(1), 1-12. LINK
126.
Wu, Q., Sakata, M. K., Wu, D., Yamanaka, H., & Minamoto, T. (2021). Application of environmental DNA metabarcoding in a lake with extensive algal blooms. Limnology, 22(3), 363-370. LINK
125.
Tenma, H., Tsunekawa, K., Fujiyoshi, R., Takai, H., Hirose, M., Masai, N., Sumi, K., Takihana, Y., Yanagisawa, S., Tsuchida, K., Ohara, K., Jo, T.,Takagi, M., Ota, A., Iwata. H., Yaoi, Y., & Minamoto, T. (2021). Spatiotemporal distribution of Flavobacterium psychrophilum and ayu Plecoglossus altivelis in rivers revealed by environmental DNA analysis. Fisheries science, 87(3), 321-330. LINK
124.
Takasaki, K., Aihara, H., Imanaka, T., Matsudaira, T., Tsukahara, K., Usui, A., Osaki, S., & Doi, H. (2021). Water pre-filtration methods to improve environmental DNA detection by real-time PCR and metabarcoding. Plos one, 16(5), e0250162. LINK
123.
Takahashi, S., Takada, S., Yamanaka, H., Masuda, R., & Kasai, A. (2021). Intraspecific genetic variability and diurnal activity affect environmental DNA detection in Japanese eel. PloS one, 16(9), e0255576. LINK
122.
Saito, T., & Doi, H. (2021). Degradation modeling of water environmental DNA: Experiments on multiple DNA sources in pond and seawater. Environmental DNA, 3(4), 850-860. LINK
121.
Saito, T., & Doi, H. (2021). A model and simulation of the influence of temperature and amplicon length on environmental DNA degradation rates: a meta-analysis approach. Frontiers in Ecology and Evolution, 9,623831. LINK
120.
Rodriguez‐Ezpeleta, N., Morissette, O., Bean, C. W., Manu, S., Banerjee, P., Lacoursière‐Roussel, A., Beng, K, C., Elizabeth Alter, S., Roger, F., Holman, L, E., Stewart, K, A., Monaghan, M, T., Mauvisseau, Q., Mirimin, L., Wangensteen, O, S., Antognazza, C, M., Helyar, S, J., de Boer, H., Monchamp, M. E., Nijland, R., Abbott, C. L., Doi, H., Barnes, M, A., Leray, M., Hablützel, P. I., & Deiner, K. (2021). Trade‐offs between reducing complex terminology and producing accurate interpretations from environmental DNA: Comment on “Environmental DNA: What’s behind the term?” by Pawlowski et al.,(2020). Molecular Ecology, 30(19), 4601-4605. LINK
119.
Osathanunkul, M., & Minamoto, T. (2021). eDNA‐based detection of a vulnerable crocodile newt (Tylototriton uyenoi) to influence government policy and raise public awareness. Diversity and Distributions, 27(10), 1958-1965. LINK
118.
Osathanunkul, M., & Minamoto, T. (2021). Molecular detection of giant snakeheads, Channa micropeltes (Cuvier, 1831), one of the most troublesome fish species. Scientific Reports, 11(1), 1-7. LINK
117.
Ogata, M., Masuda, R., Harino, H., Sakata, M. K., Hatakeyama, M., Yokoyama, K., Yamashita, Y., & Minamoto, T. (2021). Environmental DNA preserved in marine sediment for detecting jellyfish blooms after a tsunami. Scientific Reports, 11(1), 1-14. LINK
116.
Nakao, R., Inui, R., Akamatsu, Y., Goto, M., Doi, H., & Matsuoka, S. (2021). Illumina iSeq 100 and MiSeq exhibit similar performance in freshwater fish environmental DNA metabarcoding. Scientific reports, 11(1), 1-10. LINK
115.
Matsuoka, S., Sugiyama, Y., Shimono, Y., Ushio, M., & Doi, H. (2021). Evaluation of seasonal dynamics of fungal DNA assemblages in a flow‐regulated stream in a restored forest using eDNA metabarcoding. Environmental Microbiology, 23(8), 4797-4806. LINK
114.
Jo, T., Sakata, M. K., Murakami, H., Masuda, R., & Minamoto, T. (2021). Universal performance of benzalkonium chloride for the preservation of environmental DNA in seawater samples. Limnology and Oceanography: Methods, 19(11), 758-768. LINK
113.
Jo, T., & Minamoto, T. (2021). Complex interactions between environmental DNA (eDNA) state and water chemistries on eDNA persistence suggested by meta‐analyses. Molecular Ecology Resources, 21(5), 1490-1503. LINK
112.
Hirohara, T., Tsuri, K., Miyagawa, K., Paine, R. T., & Yamanaka, H. (2021). The application of PMA (propidium monoazide) to different target sequence lengths of Zebrafish eDNA: a new approach aimed toward improving environmental DNA ecology and biological surveillance. Frontiers in Ecology and Evolution, 277. LINK
111.
Fukuda, A., Usui, M., Ushiyama, K., Shrestha, D., Hashimoto, N., Sakata, M. K., Minamoto, T., Yoshida, O., Murakami, K., Tamura, Y., & Asai, T. (2021). Prevalence of antimicrobial-resistant Escherichia coli in migratory greater white-fronted geese (Anser albifrons) and their habitat in Miyajimanuma, Japan. The Journal of Wildlife Diseases, 57(4), 954-958. LINK
110.
Fukaya, K., Murakami, H., Yoon, S., Minami, K., Osada, Y., Yamamoto, S., Masuda, R., Kasai, A., Miyashita, K., Minamoto, T., & Kondoh, M. (2021). Estimating fish population abundance by integrating quantitative data on environmental DNA and hydrodynamic modelling. Molecular Ecology, 30(13), 3057-3067. LINK
109.
Doi, H., Watanabe, T., Nishizawa, N., Saito, T., Nagata, H., Kameda, Y., Maki, N., Ikeda, K., & Fukuzawa, T. (2021). On‐site environmental DNA detection of species using ultrarapid mobile PCR. Molecular Ecology Resources, 21(7), 2364-2368. LINK
108.
Doi, H., Inui, R., Matsuoka, S., Akamatsu, Y., Goto, M., & Kono, T. (2021). Estimation of biodiversity metrics by environmental DNA metabarcoding compared with visual and capture surveys of river fish communities. Freshwater Biology, 66(7), 1257-1266. LINK
107.
Deiner, K., Yamanaka, H., & Bernatchez, L. (2021). The future of biodiversity monitoring and conservation utilizing environmental DNA. Environmental DNA, 3(1), 3-7. LINK
106.
Cheung, P. Y., Nozawa, Y., & Miki, T. (2021). Ecosystem engineering structures facilitate ecological resilience: A coral reef model. Ecological Research, 36(4), 673-685. LINK
105.
Chang, C. W., Miki, T., Ushio, M., Ke, P. J., Lu, H. P., Shiah, F. K., & Hsieh, C. H. (2021). Reconstructing large interaction networks from empirical time series data. Ecology Letters, 24(12), 2763-2774. LINK
104.
Kasai, A., Yamazaki, A., Ahn, H., Yamanaka, H., Kameyama, S., Masuda, R., Azuma, N., Kimura, S., Karaki, T., Kurokawa, Y., & Yamashita, Y. (2021). Distribution of Japanese eel Anguilla japonica revealed by environmental DNA. Frontiers Ecology And Evolution, 9, 83. LINK
103.
Wada, K., Kishimoto, N., Somiya, I., Sato, T., & Ueno, K. (2021). Impact of Submerged Macrophytes on Behavior of Organic Carbon and Nutrients: An Experimental Study. Journal of Water and Environment Technology, 19(1), 35-47. LINK
102.
Tsuri, K., Ikeda, S., Hirohara, T., Shimada, Y., Minamoto, T., & Yamanaka, H. (2021). Messenger RNA typing of environmental RNA (eRNA): A case study on zebrafish tank water with perspectives for the future development of eRNA analysis on aquatic vertebrates. Environmental DNA, 3(1), 14-21. LINK
101.
Tomaru, Y., Yamaguchi, H., & Miki, T. (2021). Growth Rate-dependent Cell Death of Diatoms due to Viral Infection and Their Subsequent Coexistence in a Semi-continuous Culture System. Microbes and Environments, 36(1), ME20116. LINK
100.
Minamoto, T., Miya, M., Sado, T., Seino, S., Doi, H., Kondoh, M., Nakamura, K., Takahara, T., Yamamoto, S., Yamanaka, H., Araki, H., Iwasaki, W., Kasai, A., Masuda, R., Uchii, K. (2021). An illustrated manual for environmental DNA research: Water sampling guidelines and experimental protocols. Environmental DNA, 3(1), 8-13. LINK
99.
Jo, T.,Ikeda, S., Fukuoka, A., Inagawa, T., Okitsu, J.,Katano, I.,Doi, H.,Nakai, K.,Ichiyanagi,H.,& Minamoto,T. (2021) Utility of environmental DNA analysis for effective monitoring of invasive fish species in reservoirs. Ecosphere, 12, e03643. LINK
98.
Hoshino, T., Nakao, R., Doi, H., & Minamoto, T. (2021). Simultaneous absolute quantification and sequencing of fish environmental DNA in a mesocosm by quantitative sequencing technique. Scientific reports, 11, 4372. LINK
97.
Doi, H., Minamoto, T., Takahara, T., Tsuji, S., Uchii, K., Yamamoto, S., Katano, I.,& Yamanaka, H. (2021). Compilation of real-time PCR conditions toward the standardization of eDNA methods. Ecological Research, 36(3), 379-388. LINK
96.
Chen, J., Chen, Z., Liu, S., Guo, W., Li, D., Minamoto, T., & Gao, T. (2021). Revealing an Invasion Risk of Fish Species in Qingdao Underwater World by Environmental DNA Metabarcoding. Journal of Ocean University of China, 20(1), 124-136. LINK
95.
Oka, S. I., Doi, H., Miyamoto, K., Hanahara, N., Sado, T., & Miya, M. (2021). Environmental DNA metabarcoding for biodiversity monitoring of a highly diverse tropical fish community in a coral reef lagoon: Estimation of species richness and detection of habitat segregation. Environmental DNA, 3(1), 55-69. LINK
94.
Okada, R., Tsuji, S., Shibata, N., Morita, K., Kitagawa, T., & Yamanaka, H. (2021). Environmental DNA analysis provides an overview of distribution patterns of two dojo loach species within the Naka-ikemi Wetland, Fukui Prefecture, Japan. Ichthyological Research, 68(1), 198-206. LINK
93.
Kawatsu, K., Ushio, M., Van Veen, F.J.K. & Kondoh, M. (2021). Are networks of trophic interactions sufficient for understanding the dynamics of multi-trophic communities? Analysis of a tri-trophic insect food-web time-series. Ecology Letters, 24(3) 543-552. LINK
92.
Doi, H., Akamatsu, Y., Goto, M., Inui, R., Komuro, T., Nagano, M., & Minamoto, T. (2021). Broad-scale detection of environmental DNA for an invasive macrophyte and the relationship between DNA concentration and coverage in rivers. Biological Invasions, 23(2), 507-520. LINK
91.
Suetsugu, K., Matsuoka, S., Shutoh, K., Okada, H., Taketomi, S., Onimaru, K., Tanabe, A. S., & Yamanaka, H. (2021). Mycorrhizal communities of two closely related species, Pyrola subaphylla and P. japonica, with contrasting degrees of mycoheterotrophy in a sympatric habitat. Mycorrhiza, 31, 219-229. LINK
90.
Sakata, M. K., Watanabe, T., Maki, N., Ikeda, K., Kosuge, T., Okada, H., Yamanaka, H., Sado, T., Miya, M., & Minamoto, T. (2021). Determining an effective sampling method for eDNA metabarcoding: a case study for fish biodiversity monitoring in a small, natural river. Limnology, 22, 221-235. LINK
89.
Yonezawa, S., Ushio, M., Yamanaka, H., Miya, M., Takayanagi, A., & Isagi, Y. (2020). Environmental DNA metabarcoding reveals the presence of a small, quick-moving, nocturnal water shrew in a forest stream. Conservation Genetics, 21(6), 1079-1084. LINK
88.
Yamamichi, M., Kyogoku, D., Iritani, R., Kobayashi, K., Takahashi, Y., Tsurui-Sato, K., Yamawo, A., Dobata, S., Tsuji, K., & Kondoh, M. (2020). Intraspecific adaptation load: a mechanism for species coexistence. Trends in Ecology & Evolution, 35(10), 897-907. LINK
87.
Wada, T., Doi, H., Togaki, D., Kaida, R., Nagano, M., Katano, I., Suzuki, M., Ohtani, T., & Mitsuhashi, H. (2020). Exploring a legendary giant squid: an environmental DNA approach. Marine Biology, 167(11), 1-6. LINK
86.
Tsuji, S., Maruyama, A., Miya, M., Ushio, M., Sato, H., Minamoto, T., & Yamanaka, H. (2020). Environmental DNA analysis shows high potential as a tool for estimating intraspecific genetic diversity in a wild fish population. Molecular ecology resources, 20(5), 1248-1258. LINK
85.
Takeshita, D., Terui, S., Ikeda, K., Mitsuzuka, T., Osathanunkul, M., & Minamoto, T. (2020). Projection range of eDNA analysis in marshes: a suggestion from the Siberian salamander (Salamandrella keyserlingii) inhabiting the Kushiro marsh, Japan. PeerJ, 8, e9764. LINK
84.
Takahashi, S., Sakata, M. K., Minamoto, T., & Masuda, R. (2020). Comparing the efficiency of open and enclosed filtration systems in environmental DNA quantification for fish and jellyfish. PloS one, 15(4), e0231718. LINK
83.
Takahara, T., Taguchi, J., Yamagishi, S., Doi, H., Ogata, S., Yamanaka, H., & Minamoto, T. (2020). Suppression of environmental DNA degradation in water samples associated with different storage temperature and period using benzalkonium chloride. Limnology and Oceanography: Methods, 18(8), 437-445. LINK
82.
Sugiura, K., Tomita, S., Minamoto, T., Mishina, T., Iwata, A., Abe, T., Yamamoto, S., & Watanabe, K. (2020). Characterizing the spatial and temporal occurrence patterns of the endangered botiid loach Parabotia curtus by environmental DNA analysis using a newly developed species-specific primer set. Ichthyological Research, 68, 152-157. LINK
81.
Sakata, M. K., Yamamoto, S., Gotoh, R. O., Miya, M., Yamanaka, H., & Minamoto, T. (2020). Sedimentary eDNA provides different information on timescale and fish species composition compared with aqueous eDNA. Environmental DNA, 2(4), 505-518. LINK
80.
Osathanunkul, M., & Minamoto, T. (2020). A molecular survey based on eDNA to assess the presence of a clown featherback (Chitala ornata) in a confined environment. PeerJ8, e10338. LINK
79.
Muchebve, E., Takayama, Y., Akatsuka, M., Ito, K., & Minamoto, T. (2020). Feasibility Study for Seagrass Beds Monitoring Using Environmental DNA. Journal of Japan Society of Civil Engineers, Ser. B2 (Coastal Engineering)76(2), I_949-I_954. LINK
78.
Metelmann, S., Sakai, S., Kondoh, M., & Telschow, A. (2020). Evolutionary stability of plant–pollinator networks: efficient communities and a pollination dilemma. Ecology Letters23(12), 1747-1755. LINK
77.
Matsuoka,S., Doi, H., Masumoto, S., Kitagawa, R., Nishizawa, K., Tanaka, K., Hasegawa,M., Hobara, S., Osono, T., Mori, A., & Uchida M.(2020) Taxonomic, functional, and phylogenetic diversity of fungi in a forest-tundra ecotone in Quebec. Polar Science, 100594. LINK
76.
Kuwae, M., Tamai, H., Doi, H., Sakata, M. K., Minamoto, T., & Suzuki, Y. (2020). Sedimentary DNA tracks decadal-centennial changes in fish abundance. Communications biology3558. LINK
75.
Kudoh, A., Minamoto, T., & Yamamoto, S. (2020). Detection of herbivory: eDNA detection from feeding marks on leaves. Environmental DNA2(4), 627-634. LINK
74.
Kasai, A., Takada, S., Yamazaki, A., Masuda, R., & Yamanaka, H. (2020). The effect of temperature on environmental DNA degradation of Japanese eel. Fisheries Science86, 465-471. LINK
73.
Jo, T., Tomita, S., Kohmatsu, Y., Osathanunkul, M., Ushimaru, A., & Minamoto, T. (2020). Seasonal monitoring of Hida salamander Hynobius kimurae using environmental DNA with a genus-specific primer set. Endangered Species Research43, 341-352. LINK
72.
Jo, T., Murakami, H., Masuda, R., & Minamoto, T. (2020). Selective collection of long fragments of environmental DNA using larger pore size filter. Science of the Total Environment735, 139462. LINK
71.
Itakura, H., Wakiya, R., Sakata, M. K., Hsu, H. Y., Chen, S. C., Yang, C. C., Huang, Y. C., Han, Y. S., Yamamoto, S., & Minamoto, T. (2020). Estimations of riverine distribution, abundance, and biomass of Anguillid Eels in Japan and Taiwan using environmental DNA analysis. Zoological studies59, e17. LINK
70.
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